STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW55418.1Tripartite ATP-independent transporter solute receptor, DctP family. (346 aa)    
Predicted Functional Partners:
SDW55384.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
 
 0.968
SDW55357.1
TRAP transporter, DctM subunit.
 
 0.954
SDW09219.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
 
 0.898
SDW09245.1
TRAP transporter, DctM subunit.
 
 0.854
SDW93717.1
TRAP transporter, DctM subunit.
 
 0.853
SDW93693.1
TRAP-type C4-dicarboxylate transport system, small permease component.
  
 
 0.603
SDW55474.1
Predicted dehydrogenase.
 
     0.478
SDW55442.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
       0.452
SDW55328.1
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
  
    0.415
SDW58447.1
Na+/H+-dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
     
 0.408
Your Current Organism:
Marinococcus luteus
NCBI taxonomy Id: 1122204
Other names: CCTCC AA 208014, DSM 23126, KCTC 13214, M. luteus, Marinococcus luteus Wang et al. 2009, YIM 91094
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