STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW56949.1Putative multidrug resistance efflux transporter. (314 aa)    
Predicted Functional Partners:
SDW56969.1
Hypothetical protein.
       0.682
SDW56999.1
Protein of unknown function DUF83.
       0.682
SDW42507.1
Uncharacterized protein YbcI.
  
     0.583
SDW56919.1
Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling).
       0.531
SDW56893.1
Protein N-acetyltransferase, RimJ/RimL family.
  
    0.516
SDW00636.1
Uncharacterized conserved protein YjgD, DUF1641 family.
  
     0.468
SDW94529.1
Threonine/homoserine efflux transporter RhtA.
  
     0.401
Your Current Organism:
Marinococcus luteus
NCBI taxonomy Id: 1122204
Other names: CCTCC AA 208014, DSM 23126, KCTC 13214, M. luteus, Marinococcus luteus Wang et al. 2009, YIM 91094
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.