STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW86442.1Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (507 aa)    
Predicted Functional Partners:
SDW86420.1
Hypothetical protein.
 
 
  0.921
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
   
  0.903
SDW94504.1
L-proline dehydrogenase.
 
 
  0.812
SDW54347.1
Urea carboxylase.
   
 
 0.775
SDW15770.1
Glutamate synthase (NADH) large subunit.
  
 
 0.772
SDW17823.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.753
SDW08394.1
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.729
SDW69710.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.728
SDW95052.1
Glycine/D-amino acid oxidase.
  
 0.691
SDW08101.1
PTS system sucrose-specific IIB component, Glc family /PTS system sucrose-specific IIC component, Glc family.
   
 
 0.682
Your Current Organism:
Marinococcus luteus
NCBI taxonomy Id: 1122204
Other names: CCTCC AA 208014, DSM 23126, KCTC 13214, M. luteus, Marinococcus luteus Wang et al. 2009, YIM 91094
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