STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW86706.1Siderophore synthetase component. (599 aa)    
Predicted Functional Partners:
SDW86659.1
Protein N-acetyltransferase, RimJ/RimL family.
 
  0.994
SDW86636.1
Siderophore synthetase component.
  
 0.987
SDW86683.1
Lysine N6-hydroxylase.
 
 0.966
SDW86614.1
L-2,4-diaminobutyrate decarboxylase.
 
  
 0.929
SDW88670.1
Lysine N6-hydroxylase.
 
 0.904
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
  
 
 0.674
SDW46144.1
Ornithine cyclodeaminase.
  
 
 0.559
SDW11467.1
Pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.534
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.504
SDW86585.1
PRC-barrel domain-containing protein.
       0.456
Your Current Organism:
Marinococcus luteus
NCBI taxonomy Id: 1122204
Other names: CCTCC AA 208014, DSM 23126, KCTC 13214, M. luteus, Marinococcus luteus Wang et al. 2009, YIM 91094
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