STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW93825.1Aminotransferase. (392 aa)    
Predicted Functional Partners:
SDW93800.1
Transcriptional regulator, AsnC family.
 
    0.949
pheA
Prephenate dehydratase.
 
 
 0.928
SDW17823.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 0.843
SDW15770.1
Glutamate synthase (NADH) large subunit.
    
 0.814
SDW17530.1
Homocysteine S-methyltransferase.
  
 
 0.812
SDW95052.1
Glycine/D-amino acid oxidase.
  
 0.763
SDX01300.1
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase /chorismate mutase.
  
 
  0.740
SDW69710.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.737
SDW05182.1
Aspartate kinase; Belongs to the aspartokinase family.
 
 0.657
SDW02271.1
Aspartate kinase; Belongs to the aspartokinase family.
 
 0.652
Your Current Organism:
Marinococcus luteus
NCBI taxonomy Id: 1122204
Other names: CCTCC AA 208014, DSM 23126, KCTC 13214, M. luteus, Marinococcus luteus Wang et al. 2009, YIM 91094
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