STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423385_01926Unannotated protein. (295 aa)    
Predicted Functional Partners:
ptsG_2
Unannotated protein.
 
 
 0.870
sacX_3
Unannotated protein.
 
 
 0.862
treB
Unannotated protein.
  
 
 0.844
porA_1
Unannotated protein.
  
 
  0.757
GCA_000423385_01089
Unannotated protein.
  
 
 0.751
ybbH_1
Unannotated protein.
  
     0.728
GCA_000423385_01924
Unannotated protein.
 
     0.602
GCA_000423385_01925
Unannotated protein.
  
 
  0.546
pagL
Unannotated protein.
 
 
 0.471
GCA_000423385_01088
Unannotated protein.
 
  
 0.464
Your Current Organism:
Megamonas hypermegale
NCBI taxonomy Id: 1122216
Other names: M. hypermegale DSM 1672, Megamonas hypermegale DSM 1672
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.