STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422345_00141Unannotated protein. (1145 aa)    
Predicted Functional Partners:
GCA_000422345_03003
Unannotated protein.
 
 
 0.993
GCA_000422345_03211
Unannotated protein.
  
 
 
 0.972
GCA_000422345_03210
Unannotated protein.
    
 
 0.969
GCA_000422345_03001
Unannotated protein.
 
 
 
 0.946
GCA_000422345_02766
Unannotated protein.
    
 
 0.938
GCA_000422345_01954
Unannotated protein.
  
 
 0.900
GCA_000422345_00117
Unannotated protein.
  
  
 0.852
GCA_000422345_00382
Unannotated protein.
 
  
0.849
GCA_000422345_00410
Unannotated protein.
  
 
 0.844
GCA_000422345_00214
Unannotated protein.
 
  
 0.810
Your Current Organism:
Spongiibacter marinus
NCBI taxonomy Id: 1122224
Other names: Melitea salexigens DSM 19753, S. marinus DSM 19753, Spongiibacter marinus DSM 19753
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.