STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422345_00915Unannotated protein. (172 aa)    
Predicted Functional Partners:
GCA_000422345_00918
Unannotated protein.
    
  0.774
GCA_000422345_00916
Unannotated protein.
  
    0.773
GCA_000422345_00917
Unannotated protein.
       0.737
GCA_000422345_03052
Unannotated protein.
  
  
 
0.693
GCA_000422345_00914
Unannotated protein.
 
   0.678
GCA_000422345_01206
Unannotated protein.
    
  0.487
GCA_000422345_00919
Unannotated protein.
       0.481
GCA_000422345_02944
Unannotated protein.
  
  0.481
GCA_000422345_00401
Unannotated protein.
  
 
 0.455
GCA_000422345_01841
Unannotated protein.
  
     0.417
Your Current Organism:
Spongiibacter marinus
NCBI taxonomy Id: 1122224
Other names: Melitea salexigens DSM 19753, S. marinus DSM 19753, Spongiibacter marinus DSM 19753
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.