STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422345_02104Unannotated protein. (343 aa)    
Predicted Functional Partners:
GCA_000422345_00378
Unannotated protein.
  
 0.994
GCA_000422345_01956
Unannotated protein.
 
 0.982
GCA_000422345_02105
Unannotated protein.
 
     0.847
GCA_000422345_00245
Unannotated protein.
 
  
 0.677
GCA_000422345_01794
Unannotated protein.
    
 0.665
GCA_000422345_02101
Unannotated protein.
 
   
 0.644
GCA_000422345_02109
Unannotated protein.
 
  
 0.602
GCA_000422345_02103
Unannotated protein.
       0.596
GCA_000422345_01683
Unannotated protein.
  
 
 0.588
GCA_000422345_00130
Unannotated protein.
 
    0.571
Your Current Organism:
Spongiibacter marinus
NCBI taxonomy Id: 1122224
Other names: Melitea salexigens DSM 19753, S. marinus DSM 19753, Spongiibacter marinus DSM 19753
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.