STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422365_00687Unannotated protein. (233 aa)    
Predicted Functional Partners:
GCA_000422365_00686
Unannotated protein.
 0.999
GCA_000422365_00061
Unannotated protein.
  
 
 0.943
GCA_000422365_00060
Unannotated protein.
 
 
 0.875
GCA_000422365_00536
Unannotated protein.
 
 
 0.869
GCA_000422365_01860
Unannotated protein.
  
 
 0.868
GCA_000422365_00219
Unannotated protein.
  
 
 0.860
GCA_000422365_00688
Unannotated protein.
       0.596
GCA_000422365_00689
Unannotated protein.
       0.592
GCA_000422365_00690
Unannotated protein.
       0.592
GCA_000422365_01164
Unannotated protein.
  
 
 0.475
Your Current Organism:
Mesoflavibacter zeaxanthinifaciens DSM 18436
NCBI taxonomy Id: 1122225
Other names: Flavobacteriaceae bacterium TD-ZX30, M. zeaxanthinifaciens DSM 18436, Mesoflavibacter zeaxanthinifaciens NBRC 102119, Mesoflavibacter zeaxanthinifaciens TD-ZX30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.