STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422365_00894Unannotated protein. (213 aa)    
Predicted Functional Partners:
GCA_000422365_00895
Unannotated protein.
       0.803
GCA_000422365_00893
Unannotated protein.
       0.618
GCA_000422365_00896
Unannotated protein.
       0.517
GCA_000422365_00898
Unannotated protein.
       0.508
GCA_000422365_00897
Unannotated protein.
       0.499
GCA_000422365_02567
Unannotated protein.
  
     0.474
GCA_000422365_00892
Unannotated protein.
       0.435
Your Current Organism:
Mesoflavibacter zeaxanthinifaciens DSM 18436
NCBI taxonomy Id: 1122225
Other names: Flavobacteriaceae bacterium TD-ZX30, M. zeaxanthinifaciens DSM 18436, Mesoflavibacter zeaxanthinifaciens NBRC 102119, Mesoflavibacter zeaxanthinifaciens TD-ZX30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.