STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422365_02362Unannotated protein. (253 aa)    
Predicted Functional Partners:
GCA_000422365_00699
Unannotated protein.
 
      0.888
GCA_000422365_02363
Unannotated protein.
       0.811
GCA_000422365_00896
Unannotated protein.
  
 
 0.763
GCA_000422365_02361
Unannotated protein.
  
    0.743
GCA_000422365_01058
Unannotated protein.
    
  0.727
GCA_000422365_01682
Unannotated protein.
    
  0.727
GCA_000422365_00263
Unannotated protein.
   
  0.678
GCA_000422365_01490
Unannotated protein.
   
  0.678
GCA_000422365_02364
Unannotated protein.
 
     0.651
GCA_000422365_00061
Unannotated protein.
    
 0.648
Your Current Organism:
Mesoflavibacter zeaxanthinifaciens DSM 18436
NCBI taxonomy Id: 1122225
Other names: Flavobacteriaceae bacterium TD-ZX30, M. zeaxanthinifaciens DSM 18436, Mesoflavibacter zeaxanthinifaciens NBRC 102119, Mesoflavibacter zeaxanthinifaciens TD-ZX30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.