STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000430905_00260Hypothetical protein. (219 aa)    
Predicted Functional Partners:
guaA
GMP synthase [glutamine-hydrolyzing].
  
  
 0.744
mutL
DNA mismatch repair protein MutL.
 
   
 0.704
GCA_000430905_00257
Hypothetical protein.
 
  
 0.605
mutS
DNA mismatch repair protein MutS.
 
   
 0.587
rbr2_2
Rubrerythrin-2.
       0.560
pgaC_2
Poly-beta-1,6-N-acetyl-D-glucosamine synthase.
  
  
 0.543
GCA_000430905_00248
Hypothetical protein.
 
   
 0.529
dnaG
DNA primase.
    
 0.517
pheT
Phenylalanine--tRNA ligase beta subunit.
 
     0.497
gyrA
DNA gyrase subunit A.
     
 0.493
Your Current Organism:
Methanocorpusculum bavaricum
NCBI taxonomy Id: 1122230
Other names: M. bavaricum DSM 4179, Methanocorpusculum bavaricum DSM 4179
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.