STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000711905_00146Hypothetical protein. (229 aa)    
Predicted Functional Partners:
GCA_000711905_00145
Hypothetical protein.
 
     0.800
GCA_000711905_00140
Hypothetical protein.
       0.773
GCA_000711905_00141
Hypothetical protein.
       0.773
GCA_000711905_00142
Hypothetical protein.
       0.773
GCA_000711905_00143
Hypothetical protein.
       0.773
dapH
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase.
       0.773
GCA_000711905_00139
Hypothetical protein.
       0.527
nuoI_1
NADH-quinone oxidoreductase subunit I.
       0.524
Your Current Organism:
Methermicoccus shengliensis
NCBI taxonomy Id: 1122233
Other names: M. shengliensis DSM 18856, Methermicoccus shengliensis DSM 18856
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