Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000711905_00151 | GCA_000711905_00152 | GCA_000711905_00151 | GCA_000711905_00152 | Hypothetical protein. | Hypothetical protein. | 0.773 |
GCA_000711905_00151 | acyP | GCA_000711905_00151 | GCA_000711905_00153 | Hypothetical protein. | Acylphosphatase. | 0.773 |
GCA_000711905_00151 | guaB_2 | GCA_000711905_00151 | GCA_000711905_00155 | Hypothetical protein. | Inosine-5'-monophosphate dehydrogenase. | 0.773 |
GCA_000711905_00151 | gyrA | GCA_000711905_00151 | GCA_000711905_00154 | Hypothetical protein. | DNA gyrase subunit A. | 0.773 |
GCA_000711905_00152 | GCA_000711905_00151 | GCA_000711905_00152 | GCA_000711905_00151 | Hypothetical protein. | Hypothetical protein. | 0.773 |
GCA_000711905_00152 | acyP | GCA_000711905_00152 | GCA_000711905_00153 | Hypothetical protein. | Acylphosphatase. | 0.773 |
GCA_000711905_00152 | guaB_2 | GCA_000711905_00152 | GCA_000711905_00155 | Hypothetical protein. | Inosine-5'-monophosphate dehydrogenase. | 0.801 |
GCA_000711905_00152 | gyrA | GCA_000711905_00152 | GCA_000711905_00154 | Hypothetical protein. | DNA gyrase subunit A. | 0.777 |
acs | acyP | GCA_000711905_00944 | GCA_000711905_00153 | Acetyl-coenzyme A synthetase. | Acylphosphatase. | 0.740 |
acs | gatA | GCA_000711905_00944 | GCA_000711905_00571 | Acetyl-coenzyme A synthetase. | Glutamyl-tRNA(Gln) amidotransferase subunit A. | 0.749 |
acs | gbsA | GCA_000711905_00944 | GCA_000711905_00010 | Acetyl-coenzyme A synthetase. | Betaine aldehyde dehydrogenase. | 0.926 |
acs | htpX | GCA_000711905_00944 | GCA_000711905_00228 | Acetyl-coenzyme A synthetase. | Protease HtpX. | 0.870 |
acs | sucD | GCA_000711905_00944 | GCA_000711905_00259 | Acetyl-coenzyme A synthetase. | Succinate--CoA ligase [ADP-forming] subunit alpha. | 0.999 |
acyP | GCA_000711905_00151 | GCA_000711905_00153 | GCA_000711905_00151 | Acylphosphatase. | Hypothetical protein. | 0.773 |
acyP | GCA_000711905_00152 | GCA_000711905_00153 | GCA_000711905_00152 | Acylphosphatase. | Hypothetical protein. | 0.773 |
acyP | acs | GCA_000711905_00153 | GCA_000711905_00944 | Acylphosphatase. | Acetyl-coenzyme A synthetase. | 0.740 |
acyP | gatA | GCA_000711905_00153 | GCA_000711905_00571 | Acylphosphatase. | Glutamyl-tRNA(Gln) amidotransferase subunit A. | 0.827 |
acyP | gbsA | GCA_000711905_00153 | GCA_000711905_00010 | Acylphosphatase. | Betaine aldehyde dehydrogenase. | 0.786 |
acyP | guaB_2 | GCA_000711905_00153 | GCA_000711905_00155 | Acylphosphatase. | Inosine-5'-monophosphate dehydrogenase. | 0.777 |
acyP | gyrA | GCA_000711905_00153 | GCA_000711905_00154 | Acylphosphatase. | DNA gyrase subunit A. | 0.777 |
page 1 of 3