STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acyPAcylphosphatase. (93 aa)    
Predicted Functional Partners:
sucD
Succinate--CoA ligase [ADP-forming] subunit alpha.
    
 0.972
gatA
Glutamyl-tRNA(Gln) amidotransferase subunit A.
    
 0.827
htpX
Protease HtpX.
    
 0.819
gbsA
Betaine aldehyde dehydrogenase.
    
 0.786
gyrA
DNA gyrase subunit A.
       0.777
guaB_2
Inosine-5'-monophosphate dehydrogenase.
       0.777
GCA_000711905_00151
Hypothetical protein.
       0.773
GCA_000711905_00152
Hypothetical protein.
       0.773
trxB
Thioredoxin reductase.
    
  0.750
acs
Acetyl-coenzyme A synthetase.
    
 0.740
Your Current Organism:
Methermicoccus shengliensis
NCBI taxonomy Id: 1122233
Other names: M. shengliensis DSM 18856, Methermicoccus shengliensis DSM 18856
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