STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pfdA_1Prefoldin subunit alpha. (120 aa)    
Predicted Functional Partners:
pfdA_2
Prefoldin subunit alpha.
 
 0.999
bepA
Beta-barrel assembly-enhancing protease.
   
 0.928
GCA_000711905_01410
Hypothetical protein.
 
   0.840
groL
60 kDa chaperonin.
  
 
 
 0.834
groL2
60 kDa chaperonin 2.
    
 
 0.806
GCA_000711905_00851
Hypothetical protein.
    
 
 0.806
GCA_000711905_00182
Hypothetical protein.
  
    0.799
GCA_000711905_00183
Hypothetical protein.
  
    0.779
GCA_000711905_01051
Hypothetical protein.
 
  
 0.701
GCA_000711905_00511
Hypothetical protein.
  
     0.649
Your Current Organism:
Methermicoccus shengliensis
NCBI taxonomy Id: 1122233
Other names: M. shengliensis DSM 18856, Methermicoccus shengliensis DSM 18856
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