STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lrp_1Leucine-responsive regulatory protein. (138 aa)    
Predicted Functional Partners:
sucD
Succinate--CoA ligase [ADP-forming] subunit alpha.
    
  0.900
pyk
Pyruvate kinase.
    
 0.871
prxU
Selenocysteine-containing peroxiredoxin PrxU.
     
 0.607
ppsA
Phosphoenolpyruvate synthase.
    
  0.543
ilvB1
Acetolactate synthase large subunit IlvB1.
  
 
 0.483
ilvE
Branched-chain-amino-acid aminotransferase.
    
 0.479
mmgA
Acetyl-CoA acetyltransferase.
    
 0.459
ilvD
Dihydroxy-acid dehydratase.
     
 0.437
porB
Pyruvate synthase subunit PorB.
    
 0.423
porA
Pyruvate synthase subunit PorA.
    
 0.413
Your Current Organism:
Methermicoccus shengliensis
NCBI taxonomy Id: 1122233
Other names: M. shengliensis DSM 18856, Methermicoccus shengliensis DSM 18856
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.