Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000711905_00894 | fusA | GCA_000711905_00894 | GCA_000711905_00350 | Hypothetical protein. | Elongation factor G. | 0.887 |
GCA_000711905_00894 | hisS | GCA_000711905_00894 | GCA_000711905_00279 | Hypothetical protein. | Histidine--tRNA ligase. | 0.966 |
GCA_000711905_00894 | prs | GCA_000711905_00894 | GCA_000711905_01474 | Hypothetical protein. | Ribose-phosphate pyrophosphokinase. | 0.500 |
GCA_000711905_00894 | rpsI | GCA_000711905_00894 | GCA_000711905_00676 | Hypothetical protein. | 30S ribosomal protein S9. | 0.994 |
GCA_000711905_00894 | thrS | GCA_000711905_00894 | GCA_000711905_00697 | Hypothetical protein. | Threonine--tRNA ligase 1. | 0.887 |
GCA_000711905_00894 | valS | GCA_000711905_00894 | GCA_000711905_00283 | Hypothetical protein. | Valine--tRNA ligase. | 0.999 |
asnB | hisG | GCA_000711905_00844 | GCA_000711905_01061 | Asparagine synthetase B [glutamine-hydrolyzing]. | ATP phosphoribosyltransferase. | 0.944 |
asnB | hisI | GCA_000711905_00844 | GCA_000711905_00480 | Asparagine synthetase B [glutamine-hydrolyzing]. | Phosphoribosyl-AMP cyclohydrolase. | 0.600 |
asnB | hisS | GCA_000711905_00844 | GCA_000711905_00279 | Asparagine synthetase B [glutamine-hydrolyzing]. | Histidine--tRNA ligase. | 0.914 |
asnB | prs | GCA_000711905_00844 | GCA_000711905_01474 | Asparagine synthetase B [glutamine-hydrolyzing]. | Ribose-phosphate pyrophosphokinase. | 0.989 |
asnB | thrS | GCA_000711905_00844 | GCA_000711905_00697 | Asparagine synthetase B [glutamine-hydrolyzing]. | Threonine--tRNA ligase 1. | 0.580 |
asnB | valS | GCA_000711905_00844 | GCA_000711905_00283 | Asparagine synthetase B [glutamine-hydrolyzing]. | Valine--tRNA ligase. | 0.974 |
fusA | GCA_000711905_00894 | GCA_000711905_00350 | GCA_000711905_00894 | Elongation factor G. | Hypothetical protein. | 0.887 |
fusA | hisS | GCA_000711905_00350 | GCA_000711905_00279 | Elongation factor G. | Histidine--tRNA ligase. | 0.903 |
fusA | pnp_1 | GCA_000711905_00350 | GCA_000711905_00097 | Elongation factor G. | Polyribonucleotide nucleotidyltransferase. | 0.808 |
fusA | prs | GCA_000711905_00350 | GCA_000711905_01474 | Elongation factor G. | Ribose-phosphate pyrophosphokinase. | 0.848 |
fusA | rpsI | GCA_000711905_00350 | GCA_000711905_00676 | Elongation factor G. | 30S ribosomal protein S9. | 0.999 |
fusA | thrS | GCA_000711905_00350 | GCA_000711905_00697 | Elongation factor G. | Threonine--tRNA ligase 1. | 0.863 |
fusA | valS | GCA_000711905_00350 | GCA_000711905_00283 | Elongation factor G. | Valine--tRNA ligase. | 0.957 |
hisG | asnB | GCA_000711905_01061 | GCA_000711905_00844 | ATP phosphoribosyltransferase. | Asparagine synthetase B [glutamine-hydrolyzing]. | 0.944 |
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