STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000711905_00476Hypothetical protein. (196 aa)    
Predicted Functional Partners:
GCA_000711905_00024
Hypothetical protein.
 
 0.999
GCA_000711905_00076
Hypothetical protein.
   
 0.999
GCA_000711905_00099
Hypothetical protein.
  
 0.999
rplP
50S ribosomal protein L16.
  
 0.999
GCA_000711905_00180
Hypothetical protein.
 
 
 0.999
rpsK
30S ribosomal protein S11.
  
 0.999
rpsD
30S ribosomal protein S4.
   
 0.999
rpsM
30S ribosomal protein S13.
   
 
 0.999
fusA
Elongation factor G.
  
 0.999
rpsJ
30S ribosomal protein S10.
   
 0.999
Your Current Organism:
Methermicoccus shengliensis
NCBI taxonomy Id: 1122233
Other names: M. shengliensis DSM 18856, Methermicoccus shengliensis DSM 18856
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.