Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000711905_00501 | apbC | GCA_000711905_00501 | GCA_000711905_00496 | Hypothetical protein. | Iron-sulfur cluster carrier protein. | 0.497 |
GCA_000711905_00501 | guaB_5 | GCA_000711905_00501 | GCA_000711905_00498 | Hypothetical protein. | Inosine-5'-monophosphate dehydrogenase. | 0.773 |
GCA_000711905_00501 | guaB_6 | GCA_000711905_00501 | GCA_000711905_00499 | Hypothetical protein. | Inosine-5'-monophosphate dehydrogenase. | 0.818 |
GCA_000711905_00501 | guaB_7 | GCA_000711905_00501 | GCA_000711905_00500 | Hypothetical protein. | Inosine-5'-monophosphate dehydrogenase. | 0.809 |
GCA_000711905_00501 | hrp1 | GCA_000711905_00501 | GCA_000711905_00497 | Hypothetical protein. | Hypoxic response protein 1. | 0.718 |
GCA_000711905_00501 | pheS_1 | GCA_000711905_00501 | GCA_000711905_00495 | Hypothetical protein. | Phenylalanine--tRNA ligase alpha subunit. | 0.441 |
apbC | GCA_000711905_00501 | GCA_000711905_00496 | GCA_000711905_00501 | Iron-sulfur cluster carrier protein. | Hypothetical protein. | 0.497 |
apbC | asnB | GCA_000711905_00496 | GCA_000711905_00844 | Iron-sulfur cluster carrier protein. | Asparagine synthetase B [glutamine-hydrolyzing]. | 0.560 |
apbC | guaA_2 | GCA_000711905_00496 | GCA_000711905_00869 | Iron-sulfur cluster carrier protein. | GMP synthase [glutamine-hydrolyzing]. | 0.412 |
apbC | guaB_5 | GCA_000711905_00496 | GCA_000711905_00498 | Iron-sulfur cluster carrier protein. | Inosine-5'-monophosphate dehydrogenase. | 0.525 |
apbC | guaB_6 | GCA_000711905_00496 | GCA_000711905_00499 | Iron-sulfur cluster carrier protein. | Inosine-5'-monophosphate dehydrogenase. | 0.525 |
apbC | guaB_7 | GCA_000711905_00496 | GCA_000711905_00500 | Iron-sulfur cluster carrier protein. | Inosine-5'-monophosphate dehydrogenase. | 0.525 |
apbC | hrp1 | GCA_000711905_00496 | GCA_000711905_00497 | Iron-sulfur cluster carrier protein. | Hypoxic response protein 1. | 0.560 |
apbC | pheS_1 | GCA_000711905_00496 | GCA_000711905_00495 | Iron-sulfur cluster carrier protein. | Phenylalanine--tRNA ligase alpha subunit. | 0.665 |
asnB | apbC | GCA_000711905_00844 | GCA_000711905_00496 | Asparagine synthetase B [glutamine-hydrolyzing]. | Iron-sulfur cluster carrier protein. | 0.560 |
asnB | era | GCA_000711905_00844 | GCA_000711905_01605 | Asparagine synthetase B [glutamine-hydrolyzing]. | GTPase Era. | 0.516 |
asnB | guaA_2 | GCA_000711905_00844 | GCA_000711905_00869 | Asparagine synthetase B [glutamine-hydrolyzing]. | GMP synthase [glutamine-hydrolyzing]. | 0.995 |
asnB | guaB_5 | GCA_000711905_00844 | GCA_000711905_00498 | Asparagine synthetase B [glutamine-hydrolyzing]. | Inosine-5'-monophosphate dehydrogenase. | 0.602 |
asnB | guaB_6 | GCA_000711905_00844 | GCA_000711905_00499 | Asparagine synthetase B [glutamine-hydrolyzing]. | Inosine-5'-monophosphate dehydrogenase. | 0.534 |
asnB | guaB_7 | GCA_000711905_00844 | GCA_000711905_00500 | Asparagine synthetase B [glutamine-hydrolyzing]. | Inosine-5'-monophosphate dehydrogenase. | 0.534 |
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