STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
guaB_6Inosine-5'-monophosphate dehydrogenase. (290 aa)    
Predicted Functional Partners:
guaB_5
Inosine-5'-monophosphate dehydrogenase.
     0.952
guaB_7
Inosine-5'-monophosphate dehydrogenase.
 
     0.942
hrp1
Hypoxic response protein 1.
 
   
0.868
GCA_000711905_00501
Hypothetical protein.
 
     0.818
cheC
CheY-P phosphatase CheC.
    
 
 0.700
era
GTPase Era.
  
 0.684
pheS_1
Phenylalanine--tRNA ligase alpha subunit.
 
   
 0.551
asnB
Asparagine synthetase B [glutamine-hydrolyzing].
  
 
 0.534
guaA_2
GMP synthase [glutamine-hydrolyzing].
  
 0.530
apbC
Iron-sulfur cluster carrier protein.
   
 
 0.525
Your Current Organism:
Methermicoccus shengliensis
NCBI taxonomy Id: 1122233
Other names: M. shengliensis DSM 18856, Methermicoccus shengliensis DSM 18856
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