STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000711905_00508Hypothetical protein. (537 aa)    
Predicted Functional Partners:
tuf_2
Elongation factor Tu.
    
 
 0.791
GCA_000711905_00230
Hypothetical protein.
   
  
 0.750
rtcA
RNA 3'-terminal phosphate cyclase.
  
  
 0.717
rsmA_2
Ribosomal RNA small subunit methyltransferase A.
  
  
 0.630
GCA_000711905_00507
Putative transporter.
       0.618
truA
tRNA pseudouridine synthase A.
   
 
 0.614
GCA_000711905_00509
3-hexulose-6-phosphate synthase.
       0.588
GCA_000711905_00761
Hypothetical protein.
  
  
 0.569
hdaH
Histone deacetylase-like amidohydrolase.
   
 
 0.554
GCA_000711905_01425
Hypothetical protein.
  
    0.549
Your Current Organism:
Methermicoccus shengliensis
NCBI taxonomy Id: 1122233
Other names: M. shengliensis DSM 18856, Methermicoccus shengliensis DSM 18856
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.