Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000711905_00511 | ribB | GCA_000711905_00511 | GCA_000711905_00510 | Hypothetical protein. | 3,4-dihydroxy-2-butanone 4-phosphate synthase. | 0.854 |
bepA | cheY | GCA_000711905_00837 | GCA_000711905_00160 | Beta-barrel assembly-enhancing protease. | Chemotaxis protein CheY. | 0.709 |
bepA | folE2 | GCA_000711905_00837 | GCA_000711905_00167 | Beta-barrel assembly-enhancing protease. | GTP cyclohydrolase FolE2. | 0.718 |
bepA | mcp2 | GCA_000711905_00837 | GCA_000711905_00157 | Beta-barrel assembly-enhancing protease. | Methyl-accepting chemotaxis protein 2. | 0.783 |
bepA | moaA_2 | GCA_000711905_00837 | GCA_000711905_00523 | Beta-barrel assembly-enhancing protease. | GTP 3',8-cyclase. | 0.727 |
bepA | ndk | GCA_000711905_00837 | GCA_000711905_01157 | Beta-barrel assembly-enhancing protease. | Nucleoside diphosphate kinase. | 0.850 |
bepA | ribB | GCA_000711905_00837 | GCA_000711905_00510 | Beta-barrel assembly-enhancing protease. | 3,4-dihydroxy-2-butanone 4-phosphate synthase. | 0.721 |
cheY | bepA | GCA_000711905_00160 | GCA_000711905_00837 | Chemotaxis protein CheY. | Beta-barrel assembly-enhancing protease. | 0.709 |
cheY | folE2 | GCA_000711905_00160 | GCA_000711905_00167 | Chemotaxis protein CheY. | GTP cyclohydrolase FolE2. | 0.442 |
cheY | mcp2 | GCA_000711905_00160 | GCA_000711905_00157 | Chemotaxis protein CheY. | Methyl-accepting chemotaxis protein 2. | 0.993 |
cheY | moaA_2 | GCA_000711905_00160 | GCA_000711905_00523 | Chemotaxis protein CheY. | GTP 3',8-cyclase. | 0.727 |
cheY | ndk | GCA_000711905_00160 | GCA_000711905_01157 | Chemotaxis protein CheY. | Nucleoside diphosphate kinase. | 0.748 |
cheY | ribB | GCA_000711905_00160 | GCA_000711905_00510 | Chemotaxis protein CheY. | 3,4-dihydroxy-2-butanone 4-phosphate synthase. | 0.762 |
folE2 | bepA | GCA_000711905_00167 | GCA_000711905_00837 | GTP cyclohydrolase FolE2. | Beta-barrel assembly-enhancing protease. | 0.718 |
folE2 | cheY | GCA_000711905_00167 | GCA_000711905_00160 | GTP cyclohydrolase FolE2. | Chemotaxis protein CheY. | 0.442 |
folE2 | mcp2 | GCA_000711905_00167 | GCA_000711905_00157 | GTP cyclohydrolase FolE2. | Methyl-accepting chemotaxis protein 2. | 0.719 |
folE2 | moaA_2 | GCA_000711905_00167 | GCA_000711905_00523 | GTP cyclohydrolase FolE2. | GTP 3',8-cyclase. | 0.719 |
folE2 | ndk | GCA_000711905_00167 | GCA_000711905_01157 | GTP cyclohydrolase FolE2. | Nucleoside diphosphate kinase. | 0.720 |
folE2 | ribB | GCA_000711905_00167 | GCA_000711905_00510 | GTP cyclohydrolase FolE2. | 3,4-dihydroxy-2-butanone 4-phosphate synthase. | 0.730 |
folE2 | ribD2 | GCA_000711905_00167 | GCA_000711905_00405 | GTP cyclohydrolase FolE2. | 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase. | 0.736 |
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