STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atpBV-type ATP synthase beta chain. (466 aa)    
Predicted Functional Partners:
GCA_000711905_00591
Hypothetical protein.
 
 0.999
ntpK
V-type sodium ATPase subunit K.
 
 0.999
atpE
V-type ATP synthase subunit E.
 
 0.999
atpC
V-type ATP synthase subunit C.
 
 0.999
atpF
V-type ATP synthase subunit F.
  
 0.999
ntpA
V-type sodium ATPase catalytic subunit A.
 
0.999
ntpD
V-type sodium ATPase subunit D.
 
 0.999
moeA
Molybdopterin molybdenumtransferase.
    
 0.903
bepA
Beta-barrel assembly-enhancing protease.
   
 0.898
GCA_000711905_00563
Hypothetical protein.
  
    0.840
Your Current Organism:
Methermicoccus shengliensis
NCBI taxonomy Id: 1122233
Other names: M. shengliensis DSM 18856, Methermicoccus shengliensis DSM 18856
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.