STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hmuVHemin import ATP-binding protein HmuV. (249 aa)    
Predicted Functional Partners:
yfmC
Fe(3+)-citrate-binding protein YfmC.
 
 0.999
hmuU_1
Hemin transport system permease protein HmuU.
 0.998
hmuU_2
Hemin transport system permease protein HmuU.
 0.994
GCA_000711905_00636
S-adenosyl-L-methionine-binding protein.
  
  
 0.880
mntB
Manganese transport system membrane protein MntB.
  
 0.788
GCA_000711905_00637
Hypothetical protein.
       0.776
GCA_000711905_00638
Hypothetical protein.
       0.768
cobQ
Cobyric acid synthase.
 
 
 0.764
minD_1
Septum site-determining protein MinD.
       0.755
GCA_000711905_00640
Hypothetical protein.
       0.755
Your Current Organism:
Methermicoccus shengliensis
NCBI taxonomy Id: 1122233
Other names: M. shengliensis DSM 18856, Methermicoccus shengliensis DSM 18856
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