Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000711905_00992 | GCA_000711905_00994 | GCA_000711905_00992 | GCA_000711905_00994 | Hypothetical protein. | Hypothetical protein. | 0.452 |
GCA_000711905_00992 | trm1 | GCA_000711905_00992 | GCA_000711905_00993 | Hypothetical protein. | tRNA (guanine(26)-N(2)/guanine(27)-N(2))-dimethyltransferase. | 0.452 |
GCA_000711905_00994 | GCA_000711905_00992 | GCA_000711905_00994 | GCA_000711905_00992 | Hypothetical protein. | Hypothetical protein. | 0.452 |
GCA_000711905_00994 | crhR | GCA_000711905_00994 | GCA_000711905_00995 | Hypothetical protein. | RNA helicase CrhR. | 0.631 |
GCA_000711905_00994 | pabA | GCA_000711905_00994 | GCA_000711905_00999 | Hypothetical protein. | Aminodeoxychorismate synthase component 2. | 0.459 |
GCA_000711905_00994 | trm1 | GCA_000711905_00994 | GCA_000711905_00993 | Hypothetical protein. | tRNA (guanine(26)-N(2)/guanine(27)-N(2))-dimethyltransferase. | 0.778 |
GCA_000711905_00994 | trpA | GCA_000711905_00994 | GCA_000711905_01002 | Hypothetical protein. | Tryptophan synthase alpha chain. | 0.433 |
GCA_000711905_00994 | trpB_2 | GCA_000711905_00994 | GCA_000711905_01001 | Hypothetical protein. | Tryptophan synthase beta chain. | 0.433 |
GCA_000711905_00994 | trpC | GCA_000711905_00994 | GCA_000711905_01000 | Hypothetical protein. | Indole-3-glycerol phosphate synthase. | 0.459 |
GCA_000711905_00994 | trpD | GCA_000711905_00994 | GCA_000711905_00996 | Hypothetical protein. | Anthranilate phosphoribosyltransferase. | 0.459 |
GCA_000711905_00994 | trpE | GCA_000711905_00994 | GCA_000711905_00998 | Hypothetical protein. | Anthranilate synthase component 1. | 0.459 |
GCA_000711905_00994 | trpF | GCA_000711905_00994 | GCA_000711905_00997 | Hypothetical protein. | N-(5'-phosphoribosyl)anthranilate isomerase. | 0.459 |
crhR | GCA_000711905_00994 | GCA_000711905_00995 | GCA_000711905_00994 | RNA helicase CrhR. | Hypothetical protein. | 0.631 |
crhR | pabA | GCA_000711905_00995 | GCA_000711905_00999 | RNA helicase CrhR. | Aminodeoxychorismate synthase component 2. | 0.559 |
crhR | trm1 | GCA_000711905_00995 | GCA_000711905_00993 | RNA helicase CrhR. | tRNA (guanine(26)-N(2)/guanine(27)-N(2))-dimethyltransferase. | 0.631 |
crhR | trpA | GCA_000711905_00995 | GCA_000711905_01002 | RNA helicase CrhR. | Tryptophan synthase alpha chain. | 0.519 |
crhR | trpB_2 | GCA_000711905_00995 | GCA_000711905_01001 | RNA helicase CrhR. | Tryptophan synthase beta chain. | 0.519 |
crhR | trpC | GCA_000711905_00995 | GCA_000711905_01000 | RNA helicase CrhR. | Indole-3-glycerol phosphate synthase. | 0.559 |
crhR | trpD | GCA_000711905_00995 | GCA_000711905_00996 | RNA helicase CrhR. | Anthranilate phosphoribosyltransferase. | 0.559 |
crhR | trpE | GCA_000711905_00995 | GCA_000711905_00998 | RNA helicase CrhR. | Anthranilate synthase component 1. | 0.558 |
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