Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000711905_00332 | GCA_000711905_01333 | GCA_000711905_00332 | GCA_000711905_01333 | Hypothetical protein. | Carbon monoxide dehydrogenase/acetyl-CoA synthase subunit alpha. | 0.642 |
GCA_000711905_00332 | aprA | GCA_000711905_00332 | GCA_000711905_01308 | Hypothetical protein. | Adenylylsulfate reductase subunit alpha. | 0.769 |
GCA_000711905_00332 | mdh | GCA_000711905_00332 | GCA_000711905_01363 | Hypothetical protein. | Malate dehydrogenase. | 0.758 |
GCA_000711905_00332 | nqo9 | GCA_000711905_00332 | GCA_000711905_01294 | Hypothetical protein. | NADH-quinone oxidoreductase subunit 9. | 0.891 |
GCA_000711905_00332 | porA | GCA_000711905_00332 | GCA_000711905_01005 | Hypothetical protein. | Pyruvate synthase subunit PorA. | 0.959 |
GCA_000711905_00332 | porB | GCA_000711905_00332 | GCA_000711905_01004 | Hypothetical protein. | Pyruvate synthase subunit PorB. | 0.985 |
GCA_000711905_00332 | porD | GCA_000711905_00332 | GCA_000711905_01006 | Hypothetical protein. | Pyruvate synthase subunit PorD. | 0.757 |
GCA_000711905_00332 | pyk | GCA_000711905_00332 | GCA_000711905_01176 | Hypothetical protein. | Pyruvate kinase. | 0.968 |
GCA_000711905_00332 | sucD | GCA_000711905_00332 | GCA_000711905_00259 | Hypothetical protein. | Succinate--CoA ligase [ADP-forming] subunit alpha. | 0.685 |
GCA_000711905_01333 | GCA_000711905_00332 | GCA_000711905_01333 | GCA_000711905_00332 | Carbon monoxide dehydrogenase/acetyl-CoA synthase subunit alpha. | Hypothetical protein. | 0.642 |
GCA_000711905_01333 | nqo9 | GCA_000711905_01333 | GCA_000711905_01294 | Carbon monoxide dehydrogenase/acetyl-CoA synthase subunit alpha. | NADH-quinone oxidoreductase subunit 9. | 0.699 |
GCA_000711905_01333 | padE | GCA_000711905_01333 | GCA_000711905_01007 | Carbon monoxide dehydrogenase/acetyl-CoA synthase subunit alpha. | NADH-dependent phenylglyoxylate dehydrogenase subunit gamma. | 0.885 |
GCA_000711905_01333 | porA | GCA_000711905_01333 | GCA_000711905_01005 | Carbon monoxide dehydrogenase/acetyl-CoA synthase subunit alpha. | Pyruvate synthase subunit PorA. | 0.881 |
GCA_000711905_01333 | porB | GCA_000711905_01333 | GCA_000711905_01004 | Carbon monoxide dehydrogenase/acetyl-CoA synthase subunit alpha. | Pyruvate synthase subunit PorB. | 0.893 |
GCA_000711905_01333 | porD | GCA_000711905_01333 | GCA_000711905_01006 | Carbon monoxide dehydrogenase/acetyl-CoA synthase subunit alpha. | Pyruvate synthase subunit PorD. | 0.770 |
aprA | GCA_000711905_00332 | GCA_000711905_01308 | GCA_000711905_00332 | Adenylylsulfate reductase subunit alpha. | Hypothetical protein. | 0.769 |
aprA | mdh | GCA_000711905_01308 | GCA_000711905_01363 | Adenylylsulfate reductase subunit alpha. | Malate dehydrogenase. | 0.960 |
aprA | nqo9 | GCA_000711905_01308 | GCA_000711905_01294 | Adenylylsulfate reductase subunit alpha. | NADH-quinone oxidoreductase subunit 9. | 0.975 |
aprA | padE | GCA_000711905_01308 | GCA_000711905_01007 | Adenylylsulfate reductase subunit alpha. | NADH-dependent phenylglyoxylate dehydrogenase subunit gamma. | 0.769 |
aprA | porA | GCA_000711905_01308 | GCA_000711905_01005 | Adenylylsulfate reductase subunit alpha. | Pyruvate synthase subunit PorA. | 0.879 |
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