STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdxTPyridoxal 5'-phosphate synthase subunit PdxT. (211 aa)    
Predicted Functional Partners:
pdxS
Pyridoxal 5'-phosphate synthase subunit PdxS.
 0.999
thiD
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase.
    
 0.857
adoK
Adenosine kinase.
    
 0.781
rpiA
Ribose-5-phosphate isomerase A.
     
 0.724
pdxH
Pyridoxine/pyridoxamine 5'-phosphate oxidase.
    
  0.719
prs
Ribose-phosphate pyrophosphokinase.
    
  0.719
mtaD_2
5-methylthioadenosine/S-adenosylhomocysteine deaminase.
       0.625
ansA
L-asparaginase 1.
    
 0.512
gatC
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C.
    
  0.507
gatA
Glutamyl-tRNA(Gln) amidotransferase subunit A.
    
 0.507
Your Current Organism:
Methermicoccus shengliensis
NCBI taxonomy Id: 1122233
Other names: M. shengliensis DSM 18856, Methermicoccus shengliensis DSM 18856
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.