STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gatB_2Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B. (634 aa)    
Predicted Functional Partners:
ansA
L-asparaginase 1.
 
 0.997
gatA
Glutamyl-tRNA(Gln) amidotransferase subunit A.
  
  
 0.936
gatB_1
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B.
  
 
0.911
gatC
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C.
     
 0.866
obg_2
GTPase Obg.
       0.773
glnS
Glutamine--tRNA ligase.
 
  
 0.633
dnaG
DNA primase.
  
     0.627
aspS2
Aspartate--tRNA(Asp/Asn) ligase.
    
 0.618
asnB
Asparagine synthetase B [glutamine-hydrolyzing].
     
 0.601
GCA_000711905_01076
Hypothetical protein.
       0.561
Your Current Organism:
Methermicoccus shengliensis
NCBI taxonomy Id: 1122233
Other names: M. shengliensis DSM 18856, Methermicoccus shengliensis DSM 18856
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.