Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DmdB_1 | DmdB_2 | GCA_000711905_00267 | GCA_000711905_01487 | 2,3-dimethylmalate dehydratase small subunit. | 2,3-dimethylmalate dehydratase small subunit. | 0.856 |
DmdB_1 | GCA_000711905_00322 | GCA_000711905_00267 | GCA_000711905_00322 | 2,3-dimethylmalate dehydratase small subunit. | Citrate (Re)-synthase. | 0.845 |
DmdB_1 | dmdA | GCA_000711905_00267 | GCA_000711905_01177 | 2,3-dimethylmalate dehydratase small subunit. | 2,3-dimethylmalate dehydratase large subunit. | 0.999 |
DmdB_1 | dmlA | GCA_000711905_00267 | GCA_000711905_01488 | 2,3-dimethylmalate dehydratase small subunit. | D-malate dehydrogenase [decarboxylating]. | 0.918 |
DmdB_1 | hicd | GCA_000711905_00267 | GCA_000711905_00900 | 2,3-dimethylmalate dehydratase small subunit. | Homoisocitrate dehydrogenase. | 0.943 |
DmdB_1 | ilvC | GCA_000711905_00267 | GCA_000711905_00423 | 2,3-dimethylmalate dehydratase small subunit. | Ketol-acid reductoisomerase (NAD(+)). | 0.886 |
DmdB_1 | leuA_1 | GCA_000711905_00267 | GCA_000711905_00232 | 2,3-dimethylmalate dehydratase small subunit. | 2-isopropylmalate synthase. | 0.888 |
DmdB_1 | leuA_2 | GCA_000711905_00267 | GCA_000711905_01064 | 2,3-dimethylmalate dehydratase small subunit. | 2-isopropylmalate synthase. | 0.917 |
DmdB_1 | leuA_3 | GCA_000711905_00267 | GCA_000711905_01358 | 2,3-dimethylmalate dehydratase small subunit. | 2-isopropylmalate synthase. | 0.892 |
DmdB_1 | pyk | GCA_000711905_00267 | GCA_000711905_01176 | 2,3-dimethylmalate dehydratase small subunit. | Pyruvate kinase. | 0.930 |
DmdB_2 | DmdB_1 | GCA_000711905_01487 | GCA_000711905_00267 | 2,3-dimethylmalate dehydratase small subunit. | 2,3-dimethylmalate dehydratase small subunit. | 0.856 |
DmdB_2 | GCA_000711905_00322 | GCA_000711905_01487 | GCA_000711905_00322 | 2,3-dimethylmalate dehydratase small subunit. | Citrate (Re)-synthase. | 0.842 |
DmdB_2 | dmdA | GCA_000711905_01487 | GCA_000711905_01177 | 2,3-dimethylmalate dehydratase small subunit. | 2,3-dimethylmalate dehydratase large subunit. | 0.999 |
DmdB_2 | dmlA | GCA_000711905_01487 | GCA_000711905_01488 | 2,3-dimethylmalate dehydratase small subunit. | D-malate dehydrogenase [decarboxylating]. | 0.994 |
DmdB_2 | hicd | GCA_000711905_01487 | GCA_000711905_00900 | 2,3-dimethylmalate dehydratase small subunit. | Homoisocitrate dehydrogenase. | 0.986 |
DmdB_2 | ilvC | GCA_000711905_01487 | GCA_000711905_00423 | 2,3-dimethylmalate dehydratase small subunit. | Ketol-acid reductoisomerase (NAD(+)). | 0.843 |
DmdB_2 | leuA_1 | GCA_000711905_01487 | GCA_000711905_00232 | 2,3-dimethylmalate dehydratase small subunit. | 2-isopropylmalate synthase. | 0.937 |
DmdB_2 | leuA_2 | GCA_000711905_01487 | GCA_000711905_01064 | 2,3-dimethylmalate dehydratase small subunit. | 2-isopropylmalate synthase. | 0.775 |
DmdB_2 | leuA_3 | GCA_000711905_01487 | GCA_000711905_01358 | 2,3-dimethylmalate dehydratase small subunit. | 2-isopropylmalate synthase. | 0.937 |
DmdB_2 | pyk | GCA_000711905_01487 | GCA_000711905_01176 | 2,3-dimethylmalate dehydratase small subunit. | Pyruvate kinase. | 0.930 |
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