STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000711905_01213Hypothetical protein. (143 aa)    
Predicted Functional Partners:
GCA_000711905_01214
Hypothetical protein.
       0.773
GCA_000711905_01128
Hypothetical protein.
 
    0.624
glnA
Glutamine synthetase.
  
 
 0.528
GCA_000711905_01449
Putative glycosyltransferase.
 
  
 0.512
bepA
Beta-barrel assembly-enhancing protease.
 
   
 0.498
GCA_000711905_01212
Hypothetical protein.
       0.456
GCA_000711905_01211
Hypothetical protein.
       0.448
thiI
Putative tRNA sulfurtransferase.
  
    0.435
sppA
Protease 4.
 
  
 0.429
valS
Valine--tRNA ligase.
       0.422
Your Current Organism:
Methermicoccus shengliensis
NCBI taxonomy Id: 1122233
Other names: M. shengliensis DSM 18856, Methermicoccus shengliensis DSM 18856
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.