Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
asnB | citB | GCA_000711905_00844 | GCA_000711905_01232 | Asparagine synthetase B [glutamine-hydrolyzing]. | Aconitate hydratase A. | 0.908 |
asnB | gltA | GCA_000711905_00844 | GCA_000711905_01233 | Asparagine synthetase B [glutamine-hydrolyzing]. | Citrate synthase. | 0.416 |
asnB | pyk | GCA_000711905_00844 | GCA_000711905_01176 | Asparagine synthetase B [glutamine-hydrolyzing]. | Pyruvate kinase. | 0.715 |
citB | asnB | GCA_000711905_01232 | GCA_000711905_00844 | Aconitate hydratase A. | Asparagine synthetase B [glutamine-hydrolyzing]. | 0.908 |
citB | fba | GCA_000711905_01232 | GCA_000711905_00189 | Aconitate hydratase A. | Fructose-bisphosphate aldolase. | 0.866 |
citB | gltA | GCA_000711905_01232 | GCA_000711905_01233 | Aconitate hydratase A. | Citrate synthase. | 0.999 |
citB | nqo4 | GCA_000711905_01232 | GCA_000711905_01292 | Aconitate hydratase A. | NADH-quinone oxidoreductase subunit 4. | 0.893 |
citB | nqo5 | GCA_000711905_01232 | GCA_000711905_01291 | Aconitate hydratase A. | NADH-quinone oxidoreductase subunit 5. | 0.893 |
citB | pyk | GCA_000711905_01232 | GCA_000711905_01176 | Aconitate hydratase A. | Pyruvate kinase. | 0.950 |
citB | rplE | GCA_000711905_01232 | GCA_000711905_00613 | Aconitate hydratase A. | 50S ribosomal protein L5. | 0.861 |
citB | rplF | GCA_000711905_01232 | GCA_000711905_00610 | Aconitate hydratase A. | 50S ribosomal protein L6. | 0.857 |
citB | rpsH | GCA_000711905_01232 | GCA_000711905_00611 | Aconitate hydratase A. | 30S ribosomal protein S8. | 0.863 |
citB | rpsI | GCA_000711905_01232 | GCA_000711905_00676 | Aconitate hydratase A. | 30S ribosomal protein S9. | 0.999 |
fba | citB | GCA_000711905_00189 | GCA_000711905_01232 | Fructose-bisphosphate aldolase. | Aconitate hydratase A. | 0.866 |
fba | gltA | GCA_000711905_00189 | GCA_000711905_01233 | Fructose-bisphosphate aldolase. | Citrate synthase. | 0.461 |
fba | pyk | GCA_000711905_00189 | GCA_000711905_01176 | Fructose-bisphosphate aldolase. | Pyruvate kinase. | 0.985 |
fba | rplE | GCA_000711905_00189 | GCA_000711905_00613 | Fructose-bisphosphate aldolase. | 50S ribosomal protein L5. | 0.818 |
fba | rplF | GCA_000711905_00189 | GCA_000711905_00610 | Fructose-bisphosphate aldolase. | 50S ribosomal protein L6. | 0.817 |
fba | rpsH | GCA_000711905_00189 | GCA_000711905_00611 | Fructose-bisphosphate aldolase. | 30S ribosomal protein S8. | 0.806 |
fba | rpsI | GCA_000711905_00189 | GCA_000711905_00676 | Fructose-bisphosphate aldolase. | 30S ribosomal protein S9. | 0.937 |
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