Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000711905_00075 | GCA_000711905_00077 | GCA_000711905_00075 | GCA_000711905_00077 | Geranylgeranylglyceryl phosphate synthase. | Hypothetical protein. | 0.729 |
GCA_000711905_00075 | GCA_000711905_01340 | GCA_000711905_00075 | GCA_000711905_01340 | Geranylgeranylglyceryl phosphate synthase. | Homogentisate phytyltransferase. | 0.979 |
GCA_000711905_00077 | GCA_000711905_00075 | GCA_000711905_00077 | GCA_000711905_00075 | Hypothetical protein. | Geranylgeranylglyceryl phosphate synthase. | 0.729 |
GCA_000711905_00077 | GCA_000711905_00934 | GCA_000711905_00077 | GCA_000711905_00934 | Hypothetical protein. | Hypothetical protein. | 0.797 |
GCA_000711905_00077 | GCA_000711905_01091 | GCA_000711905_00077 | GCA_000711905_01091 | Hypothetical protein. | Putative thiazole biosynthetic enzyme. | 0.783 |
GCA_000711905_00077 | GCA_000711905_01340 | GCA_000711905_00077 | GCA_000711905_01340 | Hypothetical protein. | Homogentisate phytyltransferase. | 0.880 |
GCA_000711905_00077 | dnrF | GCA_000711905_00077 | GCA_000711905_00278 | Hypothetical protein. | Aklavinone 12-hydroxylase DnrF. | 0.704 |
GCA_000711905_00077 | mhpA | GCA_000711905_00077 | GCA_000711905_00587 | Hypothetical protein. | 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase. | 0.777 |
GCA_000711905_00217 | GCA_000711905_01340 | GCA_000711905_00217 | GCA_000711905_01340 | Chorismate pyruvate-lyase. | Homogentisate phytyltransferase. | 0.903 |
GCA_000711905_00217 | ubiD | GCA_000711905_00217 | GCA_000711905_00505 | Chorismate pyruvate-lyase. | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase. | 0.538 |
GCA_000711905_00934 | GCA_000711905_00077 | GCA_000711905_00934 | GCA_000711905_00077 | Hypothetical protein. | Hypothetical protein. | 0.797 |
GCA_000711905_00934 | GCA_000711905_01091 | GCA_000711905_00934 | GCA_000711905_01091 | Hypothetical protein. | Putative thiazole biosynthetic enzyme. | 0.739 |
GCA_000711905_00934 | GCA_000711905_01340 | GCA_000711905_00934 | GCA_000711905_01340 | Hypothetical protein. | Homogentisate phytyltransferase. | 0.950 |
GCA_000711905_00934 | dnrF | GCA_000711905_00934 | GCA_000711905_00278 | Hypothetical protein. | Aklavinone 12-hydroxylase DnrF. | 0.739 |
GCA_000711905_00934 | mhpA | GCA_000711905_00934 | GCA_000711905_00587 | Hypothetical protein. | 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase. | 0.864 |
GCA_000711905_01091 | GCA_000711905_00077 | GCA_000711905_01091 | GCA_000711905_00077 | Putative thiazole biosynthetic enzyme. | Hypothetical protein. | 0.783 |
GCA_000711905_01091 | GCA_000711905_00934 | GCA_000711905_01091 | GCA_000711905_00934 | Putative thiazole biosynthetic enzyme. | Hypothetical protein. | 0.739 |
GCA_000711905_01091 | GCA_000711905_01340 | GCA_000711905_01091 | GCA_000711905_01340 | Putative thiazole biosynthetic enzyme. | Homogentisate phytyltransferase. | 0.920 |
GCA_000711905_01091 | dnrF | GCA_000711905_01091 | GCA_000711905_00278 | Putative thiazole biosynthetic enzyme. | Aklavinone 12-hydroxylase DnrF. | 0.779 |
GCA_000711905_01091 | mhpA | GCA_000711905_01091 | GCA_000711905_00587 | Putative thiazole biosynthetic enzyme. | 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase. | 0.773 |
page 1 of 3