Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000711905_00825 | cmpB | GCA_000711905_00825 | GCA_000711905_00770 | Hypothetical protein. | Bicarbonate transport system permease protein CmpB. | 0.986 |
GCA_000711905_00825 | cmpD | GCA_000711905_00825 | GCA_000711905_00769 | Hypothetical protein. | Bicarbonate transport ATP-binding protein CmpD. | 0.989 |
GCA_000711905_00825 | cysH | GCA_000711905_00825 | GCA_000711905_01370 | Hypothetical protein. | Phosphoadenosine phosphosulfate reductase. | 0.605 |
GCA_000711905_00825 | fdhF_2 | GCA_000711905_00825 | GCA_000711905_01083 | Hypothetical protein. | Formate dehydrogenase H. | 0.854 |
GCA_000711905_00825 | nasD | GCA_000711905_00825 | GCA_000711905_01360 | Hypothetical protein. | Nitrite reductase [NAD(P)H]. | 0.866 |
GCA_000711905_00825 | sir | GCA_000711905_00825 | GCA_000711905_01306 | Hypothetical protein. | Sulfite reductase [ferredoxin]. | 0.665 |
cmpB | GCA_000711905_00825 | GCA_000711905_00770 | GCA_000711905_00825 | Bicarbonate transport system permease protein CmpB. | Hypothetical protein. | 0.986 |
cmpB | cmpD | GCA_000711905_00770 | GCA_000711905_00769 | Bicarbonate transport system permease protein CmpB. | Bicarbonate transport ATP-binding protein CmpD. | 0.999 |
cmpB | cysH | GCA_000711905_00770 | GCA_000711905_01370 | Bicarbonate transport system permease protein CmpB. | Phosphoadenosine phosphosulfate reductase. | 0.606 |
cmpB | fdhF_2 | GCA_000711905_00770 | GCA_000711905_01083 | Bicarbonate transport system permease protein CmpB. | Formate dehydrogenase H. | 0.856 |
cmpB | nasD | GCA_000711905_00770 | GCA_000711905_01360 | Bicarbonate transport system permease protein CmpB. | Nitrite reductase [NAD(P)H]. | 0.846 |
cmpB | sir | GCA_000711905_00770 | GCA_000711905_01306 | Bicarbonate transport system permease protein CmpB. | Sulfite reductase [ferredoxin]. | 0.629 |
cmpD | GCA_000711905_00825 | GCA_000711905_00769 | GCA_000711905_00825 | Bicarbonate transport ATP-binding protein CmpD. | Hypothetical protein. | 0.989 |
cmpD | cmpB | GCA_000711905_00769 | GCA_000711905_00770 | Bicarbonate transport ATP-binding protein CmpD. | Bicarbonate transport system permease protein CmpB. | 0.999 |
cmpD | cysH | GCA_000711905_00769 | GCA_000711905_01370 | Bicarbonate transport ATP-binding protein CmpD. | Phosphoadenosine phosphosulfate reductase. | 0.759 |
cmpD | fdhF_2 | GCA_000711905_00769 | GCA_000711905_01083 | Bicarbonate transport ATP-binding protein CmpD. | Formate dehydrogenase H. | 0.854 |
cmpD | nasD | GCA_000711905_00769 | GCA_000711905_01360 | Bicarbonate transport ATP-binding protein CmpD. | Nitrite reductase [NAD(P)H]. | 0.856 |
cmpD | sir | GCA_000711905_00769 | GCA_000711905_01306 | Bicarbonate transport ATP-binding protein CmpD. | Sulfite reductase [ferredoxin]. | 0.583 |
cysH | GCA_000711905_00825 | GCA_000711905_01370 | GCA_000711905_00825 | Phosphoadenosine phosphosulfate reductase. | Hypothetical protein. | 0.605 |
cysH | cmpB | GCA_000711905_01370 | GCA_000711905_00770 | Phosphoadenosine phosphosulfate reductase. | Bicarbonate transport system permease protein CmpB. | 0.606 |
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