STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arsAArsenical pump-driving ATPase. (388 aa)    
Predicted Functional Partners:
bepA
Beta-barrel assembly-enhancing protease.
    
 0.856
pyrF
Orotidine 5'-phosphate decarboxylase.
    
 
 0.810
GCA_000711905_01351
Hypothetical protein.
   
   0.787
ileS
Isoleucine--tRNA ligase.
    
 
 0.786
ulaG
Putative L-ascorbate-6-phosphate lactonase UlaG.
       0.777
GCA_000711905_01400
Hypothetical protein.
       0.773
GCA_000711905_00375
Hypothetical protein.
  
   0.646
yrbG
Inner membrane protein YrbG.
  
   0.646
GCA_000711905_00507
Putative transporter.
     
 0.627
ftsH_3
ATP-dependent zinc metalloprotease FtsH.
 
 
 0.615
Your Current Organism:
Methermicoccus shengliensis
NCBI taxonomy Id: 1122233
Other names: M. shengliensis DSM 18856, Methermicoccus shengliensis DSM 18856
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