STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dmlAD-malate dehydrogenase [decarboxylating]. (383 aa)    
Predicted Functional Partners:
DmdB_2
2,3-dimethylmalate dehydratase small subunit.
 
 
 0.994
hacA
Homoaconitase large subunit.
 0.969
dmdA
2,3-dimethylmalate dehydratase large subunit.
 0.949
ilvH
Putative acetolactate synthase small subunit.
  
 0.928
DmdB_1
2,3-dimethylmalate dehydratase small subunit.
 
 
 0.918
ilvB1
Acetolactate synthase large subunit IlvB1.
 
 0.906
gltA
Citrate synthase.
  
 0.853
ilvD
Dihydroxy-acid dehydratase.
 
  
 0.805
ilvC
Ketol-acid reductoisomerase (NAD(+)).
  
  
 0.802
pncC
Nicotinamide-nucleotide amidohydrolase PncC.
      0.758
Your Current Organism:
Methermicoccus shengliensis
NCBI taxonomy Id: 1122233
Other names: M. shengliensis DSM 18856, Methermicoccus shengliensis DSM 18856
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