STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iscUIron-sulfur cluster assembly scaffold protein IscU. (211 aa)    
Predicted Functional Partners:
csd
Putative cysteine desulfurase.
  
 0.999
iscS
Cysteine desulfurase IscS.
 
 0.999
GCA_000711905_01505
Putative ABC transporter ATP-binding protein.
  
  
 0.992
sufB
FeS cluster assembly protein SufB.
  
  
 0.987
dnaK
Chaperone protein DnaK.
  
 
 0.960
tusA_2
Sulfurtransferase TusA.
    
 0.778
moaD
Molybdopterin synthase sulfur carrier subunit.
    
 0.740
nqo5
NADH-quinone oxidoreductase subunit 5.
  
  
 0.683
nqo4
NADH-quinone oxidoreductase subunit 4.
  
  
 0.683
dnaJ_2
Chaperone protein DnaJ.
  
 
 0.679
Your Current Organism:
Methermicoccus shengliensis
NCBI taxonomy Id: 1122233
Other names: M. shengliensis DSM 18856, Methermicoccus shengliensis DSM 18856
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.