Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000711905_00776 | GCA_000711905_01340 | GCA_000711905_00776 | GCA_000711905_01340 | Hypothetical protein. | Homogentisate phytyltransferase. | 0.432 |
GCA_000711905_00776 | bchI | GCA_000711905_00776 | GCA_000711905_01261 | Hypothetical protein. | Magnesium-chelatase 38 kDa subunit. | 0.999 |
GCA_000711905_00776 | crtI | GCA_000711905_00776 | GCA_000711905_01388 | Hypothetical protein. | Phytoene desaturase (lycopene-forming). | 0.607 |
GCA_000711905_00776 | crtN_1 | GCA_000711905_00776 | GCA_000711905_01515 | Hypothetical protein. | Dehydrosqualene desaturase. | 0.548 |
GCA_000711905_00776 | gbsA | GCA_000711905_00776 | GCA_000711905_00010 | Hypothetical protein. | Betaine aldehyde dehydrogenase. | 0.760 |
GCA_000711905_01340 | GCA_000711905_00776 | GCA_000711905_01340 | GCA_000711905_00776 | Homogentisate phytyltransferase. | Hypothetical protein. | 0.432 |
GCA_000711905_01340 | bchI | GCA_000711905_01340 | GCA_000711905_01261 | Homogentisate phytyltransferase. | Magnesium-chelatase 38 kDa subunit. | 0.669 |
GCA_000711905_01340 | crtI | GCA_000711905_01340 | GCA_000711905_01388 | Homogentisate phytyltransferase. | Phytoene desaturase (lycopene-forming). | 0.733 |
GCA_000711905_01340 | crtN_1 | GCA_000711905_01340 | GCA_000711905_01515 | Homogentisate phytyltransferase. | Dehydrosqualene desaturase. | 0.755 |
GCA_000711905_01340 | dnrF | GCA_000711905_01340 | GCA_000711905_00278 | Homogentisate phytyltransferase. | Aklavinone 12-hydroxylase DnrF. | 0.924 |
GCA_000711905_01340 | icaA | GCA_000711905_01340 | GCA_000711905_00903 | Homogentisate phytyltransferase. | Poly-beta-1,6-N-acetyl-D-glucosamine synthase. | 0.458 |
GCA_000711905_01344 | crtI | GCA_000711905_01344 | GCA_000711905_01388 | Putative glycosyltransferase. | Phytoene desaturase (lycopene-forming). | 0.522 |
GCA_000711905_01344 | crtN_1 | GCA_000711905_01344 | GCA_000711905_01515 | Putative glycosyltransferase. | Dehydrosqualene desaturase. | 0.572 |
GCA_000711905_01344 | icaA | GCA_000711905_01344 | GCA_000711905_00903 | Putative glycosyltransferase. | Poly-beta-1,6-N-acetyl-D-glucosamine synthase. | 0.760 |
acr3_3 | crtN_1 | GCA_000711905_01516 | GCA_000711905_01515 | Arsenical-resistance protein Acr3. | Dehydrosqualene desaturase. | 0.773 |
acr3_3 | gabP | GCA_000711905_01516 | GCA_000711905_01517 | Arsenical-resistance protein Acr3. | GABA permease. | 0.566 |
bchI | GCA_000711905_00776 | GCA_000711905_01261 | GCA_000711905_00776 | Magnesium-chelatase 38 kDa subunit. | Hypothetical protein. | 0.999 |
bchI | GCA_000711905_01340 | GCA_000711905_01261 | GCA_000711905_01340 | Magnesium-chelatase 38 kDa subunit. | Homogentisate phytyltransferase. | 0.669 |
bchI | crtI | GCA_000711905_01261 | GCA_000711905_01388 | Magnesium-chelatase 38 kDa subunit. | Phytoene desaturase (lycopene-forming). | 0.959 |
bchI | crtN_1 | GCA_000711905_01261 | GCA_000711905_01515 | Magnesium-chelatase 38 kDa subunit. | Dehydrosqualene desaturase. | 0.961 |
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