Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000711905_00690 | gabP | GCA_000711905_00690 | GCA_000711905_01517 | Putative sphingosine-1-phosphate lyase. | GABA permease. | 0.742 |
GCA_000711905_00690 | gbsA | GCA_000711905_00690 | GCA_000711905_00010 | Putative sphingosine-1-phosphate lyase. | Betaine aldehyde dehydrogenase. | 0.884 |
GCA_000711905_00690 | pheA_1 | GCA_000711905_00690 | GCA_000711905_00473 | Putative sphingosine-1-phosphate lyase. | P-protein. | 0.751 |
GCA_000711905_01302 | gabP | GCA_000711905_01302 | GCA_000711905_01517 | Hypothetical protein. | GABA permease. | 0.837 |
GCA_000711905_01302 | gbsA | GCA_000711905_01302 | GCA_000711905_00010 | Hypothetical protein. | Betaine aldehyde dehydrogenase. | 0.942 |
GCA_000711905_01302 | nhaP2 | GCA_000711905_01302 | GCA_000711905_00108 | Hypothetical protein. | K(+)/H(+) antiporter NhaP2. | 0.965 |
GCA_000711905_01302 | truB | GCA_000711905_01302 | GCA_000711905_00599 | Hypothetical protein. | tRNA pseudouridine synthase B. | 0.458 |
fba | gabP | GCA_000711905_00189 | GCA_000711905_01517 | Fructose-bisphosphate aldolase. | GABA permease. | 0.645 |
fba | gbsA | GCA_000711905_00189 | GCA_000711905_00010 | Fructose-bisphosphate aldolase. | Betaine aldehyde dehydrogenase. | 0.855 |
gabP | GCA_000711905_00690 | GCA_000711905_01517 | GCA_000711905_00690 | GABA permease. | Putative sphingosine-1-phosphate lyase. | 0.742 |
gabP | GCA_000711905_01302 | GCA_000711905_01517 | GCA_000711905_01302 | GABA permease. | Hypothetical protein. | 0.837 |
gabP | fba | GCA_000711905_01517 | GCA_000711905_00189 | GABA permease. | Fructose-bisphosphate aldolase. | 0.645 |
gabP | gatA | GCA_000711905_01517 | GCA_000711905_00571 | GABA permease. | Glutamyl-tRNA(Gln) amidotransferase subunit A. | 0.693 |
gabP | gbsA | GCA_000711905_01517 | GCA_000711905_00010 | GABA permease. | Betaine aldehyde dehydrogenase. | 0.696 |
gabP | nadE | GCA_000711905_01517 | GCA_000711905_00415 | GABA permease. | NH(3)-dependent NAD(+) synthetase. | 0.647 |
gabP | nadK | GCA_000711905_01517 | GCA_000711905_01028 | GABA permease. | NAD kinase. | 0.664 |
gabP | nhaP2 | GCA_000711905_01517 | GCA_000711905_00108 | GABA permease. | K(+)/H(+) antiporter NhaP2. | 0.936 |
gabP | pheA_1 | GCA_000711905_01517 | GCA_000711905_00473 | GABA permease. | P-protein. | 0.671 |
gabP | truB | GCA_000711905_01517 | GCA_000711905_00599 | GABA permease. | tRNA pseudouridine synthase B. | 0.722 |
gatA | gabP | GCA_000711905_00571 | GCA_000711905_01517 | Glutamyl-tRNA(Gln) amidotransferase subunit A. | GABA permease. | 0.693 |
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