STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378225_00999Unannotated protein. (109 aa)    
Predicted Functional Partners:
GCA_000378225_01000
Unannotated protein.
       0.737
GCA_000378225_01001
Unannotated protein.
       0.737
GCA_000378225_01002
Unannotated protein.
       0.590
GCA_000378225_00998
Unannotated protein.
       0.500
Your Current Organism:
Methylophilus methylotrophus
NCBI taxonomy Id: 1122236
Other names: M. methylotrophus DSM 46235 = ATCC 53528, Methylophilus methylotrophus ATCC 53528, Methylophilus methylotrophus ATCC 53528 = DSM 46235, Methylophilus methylotrophus DSM 46235, Methylophilus methylotrophus DSM 46235 = ATCC 53528
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.