STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000378225_01975Unannotated protein. (414 aa)    
Predicted Functional Partners:
GCA_000378225_00851
Unannotated protein.
  
 0.920
GCA_000378225_01720
Unannotated protein.
 
 0.918
dapA
Unannotated protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
  
 0.894
dapB
Unannotated protein; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
 
 
 0.891
GCA_000378225_00147
Unannotated protein.
 
 
 0.806
E6Q51_00435
Unannotated protein.
 
 
 0.805
GCA_000378225_00145
Unannotated protein.
 
  
 0.790
GCA_000378225_00370
Unannotated protein.
 
 
 0.781
GCA_000378225_01974
Unannotated protein.
       0.774
GCA_000378225_00125
Unannotated protein.
  
 0.763
Your Current Organism:
Methylophilus methylotrophus
NCBI taxonomy Id: 1122236
Other names: M. methylotrophus DSM 46235 = ATCC 53528, Methylophilus methylotrophus ATCC 53528, Methylophilus methylotrophus ATCC 53528 = DSM 46235, Methylophilus methylotrophus DSM 46235, Methylophilus methylotrophus DSM 46235 = ATCC 53528
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.