STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422745_00819Unannotated protein. (642 aa)    
Predicted Functional Partners:
GCA_000422745_00522
Unannotated protein.
  
 
 0.852
GCA_000422745_02130
Unannotated protein.
  
  
 0.838
GCA_000422745_02727
Unannotated protein.
  
 
 0.783
GCA_000422745_00968
Unannotated protein.
     
 0.755
GCA_000422745_02132
Unannotated protein.
     
 0.755
GCA_000422745_01529
Unannotated protein.
  
     0.547
GCA_000422745_00822
Unannotated protein.
 
     0.535
GCA_000422745_00564
Unannotated protein.
  
  
  0.528
GCA_000422745_01102
Unannotated protein.
  
     0.526
GCA_000422745_01636
Unannotated protein.
  
     0.513
Your Current Organism:
Microbacterium gubbeenense
NCBI taxonomy Id: 1122237
Other names: M. gubbeenense DSM 15944, Microbacterium gubbeenense DSM 15944
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.