STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000422745_01363Unannotated protein. (1078 aa)    
Predicted Functional Partners:
GCA_000422745_01364
Unannotated protein.
 
 
  0.986
GCA_000422745_00976
Unannotated protein.
  
 0.958
GCA_000422745_02439
Unannotated protein.
 
 0.902
GCA_000422745_01367
Unannotated protein.
 
 
  0.895
GCA_000422745_01773
Unannotated protein.
  
 0.888
GCA_000422745_01745
Unannotated protein.
 
  
 0.881
GCA_000422745_00069
Unannotated protein.
  
 
 0.869
GCA_000422745_00580
Unannotated protein.
 
 
 
0.862
GCA_000422745_02386
Unannotated protein.
   
  0.859
GCA_000422745_01427
Unannotated protein.
  
 
 0.833
Your Current Organism:
Microbacterium gubbeenense
NCBI taxonomy Id: 1122237
Other names: M. gubbeenense DSM 15944, Microbacterium gubbeenense DSM 15944
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.