STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAI18_04460Unannotated protein. (154 aa)    
Predicted Functional Partners:
DAI18_04465
Unannotated protein.
       0.773
trmJ
Unannotated protein; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.
       0.773
DAI18_11175
Unannotated protein.
   
  
 0.688
DAI18_05625
Unannotated protein; Belongs to the Dps family.
  
  
 0.672
DAI18_08005
Unannotated protein; Belongs to the catalase family.
  
  
 0.547
DAI18_04475
Unannotated protein; Belongs to the inositol monophosphatase superfamily.
       0.527
DAI18_00580
Unannotated protein.
   
    0.508
DAI18_16250
Unannotated protein.
   
  
 0.505
DAI18_16240
Unannotated protein.
   
  
 0.505
tal
Unannotated protein; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
 
    0.453
Your Current Organism:
Microvirgula aerodenitrificans
NCBI taxonomy Id: 1122240
Other names: M. aerodenitrificans DSM 15089, Microvirgula aerodenitrificans DSM 15089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.