STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAI18_01900Unannotated protein. (442 aa)    
Predicted Functional Partners:
GCA_000620105_01045
Unannotated protein.
       0.811
DAI18_01905
Unannotated protein.
       0.774
DAI18_01895
Unannotated protein.
       0.709
DAI18_01725
Unannotated protein.
    
  0.691
DAI18_01680
Unannotated protein.
   
 
 0.660
DAI18_00230
Unannotated protein.
   
 
 0.660
motA
Unannotated protein.
       0.631
DAI18_06260
Unannotated protein.
   
 0.505
DAI18_03795
Unannotated protein.
    
  0.466
DAI18_01890
Unannotated protein.
       0.456
Your Current Organism:
Microvirgula aerodenitrificans
NCBI taxonomy Id: 1122240
Other names: M. aerodenitrificans DSM 15089, Microvirgula aerodenitrificans DSM 15089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.