STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAI18_05875Unannotated protein. (109 aa)    
Predicted Functional Partners:
DAI18_03940
Unannotated protein.
 
 0.976
DAI18_05855
Unannotated protein.
 
  
 0.866
DAI18_05870
Unannotated protein.
    
  0.862
cobI
Unannotated protein; Methylates precorrin-2 at the C-20 position to produce precorrin-3A.
 
  
  0.846
DAI18_03900
Unannotated protein.
  
  
 0.827
DAI18_05865
Unannotated protein.
       0.799
DAI18_05860
Unannotated protein.
 
     0.791
cbiD
Unannotated protein; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
 
   
 0.776
DAI18_05835
Unannotated protein.
 
   
 0.759
cobM
Unannotated protein; Belongs to the precorrin methyltransferase family.
     
 0.716
Your Current Organism:
Microvirgula aerodenitrificans
NCBI taxonomy Id: 1122240
Other names: M. aerodenitrificans DSM 15089, Microvirgula aerodenitrificans DSM 15089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.