STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAI18_09205Unannotated protein. (439 aa)    
Predicted Functional Partners:
DAI18_03815
Unannotated protein.
 
 0.952
DAI18_03800
Unannotated protein.
 
 0.948
DAI18_06740
Unannotated protein.
 
 0.921
DAI18_11070
Unannotated protein.
 
 
   0.884
DAI18_00205
Unannotated protein.
 
 0.861
DAI18_06260
Unannotated protein.
 
 0.842
DAI18_01680
Unannotated protein.
 
 0.830
DAI18_17315
Unannotated protein.
  
 0.829
DAI18_03795
Unannotated protein.
 
 0.824
DAI18_06755
Unannotated protein.
  
 0.814
Your Current Organism:
Microvirgula aerodenitrificans
NCBI taxonomy Id: 1122240
Other names: M. aerodenitrificans DSM 15089, Microvirgula aerodenitrificans DSM 15089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.