STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAI18_08945Unannotated protein. (601 aa)    
Predicted Functional Partners:
DAI18_03520
Unannotated protein.
  
     0.590
DAI18_10820
Unannotated protein.
    
 
 0.588
DAI18_16675
Unannotated protein.
    
 
 0.588
DAI18_09200
Unannotated protein.
    
 
 0.588
GCA_000620105_02652
Unannotated protein.
    
 
 0.588
GCA_000620105_02817
Unannotated protein.
    
 
 0.588
DAI18_08965
Unannotated protein.
  
     0.549
DAI18_08960
Unannotated protein.
  
     0.534
DAI18_08955
Unannotated protein.
  
     0.520
DAI18_10305
Unannotated protein.
 
 
 0.513
Your Current Organism:
Microvirgula aerodenitrificans
NCBI taxonomy Id: 1122240
Other names: M. aerodenitrificans DSM 15089, Microvirgula aerodenitrificans DSM 15089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.