STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000426885_00251Unannotated protein. (440 aa)    
Predicted Functional Partners:
macB_3
Unannotated protein.
  
 
 0.950
macB_2
Unannotated protein.
  
 
 0.950
macB_1
Unannotated protein; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.950
acrB
Unannotated protein.
   
  0.640
swrC
Unannotated protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
   
  0.640
GCA_000426885_00204
Unannotated protein.
   
  0.578
oprM
Unannotated protein.
   
  0.578
tolC
Unannotated protein.
   
  0.578
walR
Unannotated protein.
       0.488
lolD
Unannotated protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
   
   0.446
Your Current Organism:
Moraxella caprae
NCBI taxonomy Id: 1122244
Other names: M. caprae DSM 19149, Moraxella caprae DSM 19149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.