STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB80639.1Phage portal protein, lambda family. (505 aa)    
Predicted Functional Partners:
SFB80603.1
Phage terminase, large subunit GpA.
 
  
 0.917
SFB80656.1
ATP-dependent protease ClpP, protease subunit; Belongs to the peptidase S14 family.
 
    0.900
SFB80694.1
Phage major capsid protein E.
 
    0.805
SFB80613.1
gpW protein; Manually curated.
       0.773
SFB80745.1
Prophage minor tail protein Z (GPZ).
  
    0.659
SFB80677.1
Bacteriophage lambda head decoration protein D.
       0.628
SFB80569.1
DNA adenine methylase.
 
   
 0.543
SFB80583.1
Protein of unknown function; Manually curated.
  
    0.518
SFB80893.1
Hypothetical protein.
 
    0.452
SFB80775.1
Hypothetical protein.
     
 0.449
Your Current Organism:
Marinospirillum celere
NCBI taxonomy Id: 1122252
Other names: DSM 18438, LMG 24610, LMG:24610, M. celere, Marinospirillum celere Namsaraev et al. 2009, VKM 2416, strain v1c_Sn-red
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.