STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB83164.1DNA replication terminus site binding protein. (288 aa)    
Predicted Functional Partners:
SFC16036.1
Uncharacterized protein; Belongs to the UPF0149 family.
  
     0.643
SFC49952.1
Protein of unknown function.
  
     0.640
SFC38008.1
Hypothetical protein.
  
     0.635
SFB91531.1
Antibiotic biosynthesis monooxygenase.
  
     0.596
SFC22335.1
Hypothetical protein.
  
     0.590
SFC22355.1
Sel1 repeat-containing protein.
  
     0.587
SFC19002.1
TraX protein.
  
     0.585
SFB83189.1
Lipoprotein-releasing system permease protein.
       0.578
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
       0.577
SFC20621.1
Hypothetical protein.
  
     0.572
Your Current Organism:
Marinospirillum celere
NCBI taxonomy Id: 1122252
Other names: DSM 18438, LMG 24610, LMG:24610, M. celere, Marinospirillum celere Namsaraev et al. 2009, VKM 2416, strain v1c_Sn-red
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.